From: Detection of asymptomatic fungal microorganisms in Pinus radiata tissue culture material
Tissue culture type and genotype number | PCR product amplifieda | Closest GenBank match of sequenced single-band PCR products | |||
---|---|---|---|---|---|
Fungal microorganism | Accession number | Sequence identity (%) | |||
Embryogenic tissue | Â | Â | Â | ||
 | 1 | yes | - | - | - |
 | 2 | yes | - | - | - |
 | 3 | yes | - | - | - |
 | 4 | yes | Uncultured ectomycorrhiza | EF218819 | 98 |
 | 5 | yes | - | - | - |
 | 6 | yes | Mycena rubromarginata | EF530939 | 91 |
 | 6 | yes | Botryosphaeria parva | AM410965 | 99 |
 | 7 | yes | - | - | - |
 | 8 | yes | - | - | - |
 | 9 | yes | - | - | - |
 | 10 | yes | Resincium bicolor | AF518763 | 99 |
Adventitious-axillary organogenesis shoots | Â | Â | |||
 | 11 | yes | Epicoccum nigrum | AF455403 | 99 |
 | 12 | yes | Trametes sp. | AY968077 | 75 |
 | 13 | yes | - | - | - |
 | 14 | yes | - | - | - |
 | 15 | yes | Oligoporus placentus | AJ249267 | 79 |
 | 16 | yes | Drechslera erythrospila | AY004782 | 99 |
 | 17 | yes | Cladosporium sp. | EF432298 | 99 |
 | 18 | yes | Oligoporus placentus | AJ249267 | 79 |
 | 19 | yes | Basidiomycete | AF519892 | 79 |
 | 20 | yes | - | - | - |
Epicotyl-axillary organogenesis shoots | Â | Â | |||
 | 11 | yes | Fungal sp. | AM231388 | 98 |
 | 12 | yes | - | - | - |
 | 13 | yes | - | - | - |
 | 14 | yes | Armillaria hinnulea | AF394918 | 97 |
 | 15 | yes | - | - | - |
 | 16 | yes | Coriolaceae | AY840564 | 93 |
 | 16 | yes | Botryobasidium subcoronatum | AJ389785 | 95 |
 | 17 | yes | Cyclaneusma minus | KM216324 | 100 |
 | 18 | yes | - | - | - |
 | 19 | yes | Phellinus sp. or Trametes sp. | AF251437/ AY840588 | 99 |
 | 20 | yes | Rhodotorula yarrowii | AF444628 | 98 |
Mature organogenesis shoots | Â | Â | |||
 | 21 | yes | Trametes versicolor | AF13996 | 95 |
 | 22 | yes | - | - | - |
 | 23 | yes | - | - | - |
 | 24 | yes | Petriella sordida | AY882360 | 98 |
 | 25 | yes | - | - | - |
 | 26 | yes | - | - | - |
 | 27 | yes | - | - | - |
 | 28 | yes | Resinicium bicolour | AF518763 | 99 |
 | 29 | yes | - | - | - |
 | 30 | yes | - | - | - |